Thanks for the reply
The 1TB did not have a boot/system partittion on it, it was a new drive. I used the repair disk to get a cmd prompt and no drives were available to it.
The HDD works fine from an external SATA to USB converter on my laptop.
The SATA ports are enabled, if you disable them the diagnostics will not run.
My usb3 ports are also not working, leading me to believe that there is something broken in the hardware, but I don't know how to further isolate the problem so I can order the parts.
